domainator genbank_to_fasta
Convert GenBank files to FASTA.
Convert a GenBank file to a FASTA file
Give at least one of these outputs: --fasta_out. - as an input or output means standard input or output, where the option says it is allowed.
| Option | Value | Default | Description |
|---|---|---|---|
-v, --verbose |
show debug output, and a traceback for errors. | ||
-q, --quiet |
show errors only: no progress messages or warnings. | ||
-i, --input |
FILE ... | required | Genbank filenames. Use - to read standard input. |
-o, --fasta_out |
FILE | Write the records to this FASTA file. Use - for standard output. |
Every command also takes --config FILE (options from a JSON or YAML file, keyed by option name) and --print_config.